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Overview

Omicsoft is the leading provider of Next Generation Sequencing, Cancer Genomics, Immunology, and Bioinformatics solutions for Next Generation Sequencing Data and Gene Expression Analysis.

Publications Citing Omicsoft

List of publications that have used Omicsoft's software, including Array Studio, Oshell, FusionMap, OSA, and OncoLand (Cancer Genomics for TCGA analysis and more). 

CXCR2 expression in tumor cells is a poor prognostic factor and promotes invasion and metastasis in lung adenocarcinoma

Matt Newman

Pierre Saintigny, Erminia Massarelli, Steven Lin, Yulong Chen, Sangeeta Goswami, Baruch Erez, Michael S. O’Reilly, Diane Liu, J. Jack Lee, Li Zhang, Yuan Ping, Carmen Behrens, Luisa M. Solis Soto, John V. Heymach, Edward S. Kim, Roy S. Herbst, Scott M. Lippman, Ignacio I. Wistuba, Waun Ki Hong, Jonathan M. Kurie, Ja Seok Koo

Cancer Res. Author manuscript; available in PMC 2014 January 15.

Published in final edited form as: Cancer Res. 2013 January 15; 73(2): 571–582. Published online 2012 November 30. doi: 10.1158/0008-5472.CAN-12-0263

PMCID: 

PMC3548940

Deletion of Skeletal Muscle SOCS3 Prevents Insulin Resistance in Obesity

Matt Newman

Sebastian Beck Jorgensen, Hayley M. O’Neill, Lykke Sylow, Jane Honeyman, Kimberly A. Hewitt, Rengasamy Palanivel, Morgan D. Fullerton, Lisa Öberg, Anudharan Balendran, Sandra Galic, Chris van der Poel, Ian A. Trounce, Gordon S. Lynch, Jonathan D. Schertzer, Gregory R. Steinberg

Diabetes. 2013 January; 62(1): 56–64. Published online 2012 December 13. doi: 10.2337/db12-0443

PMCID: 

PMC3526029

Transcriptome Changes Affecting Hedgehog and Cytokine Signalling in the Umbilical Cord: Implications for Disease Risk

Matt Newman

Walter Stünkel, Hong Pan, Siew Boom Chew, Emilia Tng, Jun Hao Tan, Li Chen, Roy Joseph, Clara Y. Cheong, Mei-Lyn Ong, Yung Seng Lee, Yap-Seng Chong, Seang Mei Saw, Michael J. Meaney, Kenneth Kwek, Allan M. Sheppard, Peter D. Gluckman, GUSTO Study Group, Joanna D. Holbrook

PLoS One. 2012; 7(7): e39744. Published online 2012 July 10. doi: 10.1371/journal.pone.0039744

PMCID: 

PMC3393728

Over Expression of Wild Type or a Catalytically Dead Mutant of SIRTUIN 6 Does Not Influence NFκB Responses

Matt Newman

Rachel Grimley, Oxana Polyakova, Jessica Vamathevan, Joanne McKenary, Brian Hayes, Champa Patel, Janet Smith, Angela Bridges, Andrew Fosberry, Anshu Bhardwaja, Bernadette Mouzon, Chun-Wa Chung, Nathalie Barrett, Nicola Richmond, Sundip Modha, Roberto Solari

PLoS One. 2012; 7(7): e39847. Published online 2012 July 6. doi: 10.1371/journal.pone.0039847

Correction in: 

PLoS One. 2012; 7(9): 10.1371/annotation/9c1a5765-6471-401f-bc74-a916c8ead46f.

PMCID: 

PMC3391194

Comparison of Soluble Guanylate Cyclase Stimulators and Activators in Models of Cardiovascular Disease Associated with Oxidative Stress

Matt Newman

Melissa H. Costell, Nicolas Ancellin, Roberta E. Bernard, Shufang Zhao, John J. Upson, Lisa A. Morgan, Kristeen Maniscalco, Alan R. Olzinski, Victoria L. T. Ballard, Kenny Herry, Pascal Grondin, Nerina Dodic, Olivier Mirguet, Anne Bouillot, Francoise Gellibert, Robert W. Coatney, John J. Lepore, Beat M. Jucker, Larry J. Jolivette, Robert N. Willette, Christine G. Schnackenberg, David J. Behm

Front Pharmacol. 2012; 3: 128. Prepublished online 2012 May 17. Published online 2012 July 5. doi: 10.3389/fphar.2012.00128

PMCID: 

PMC3389674

Human Myxomatous Mitral Valve Prolapse: Role of Bone Morphogenetic Protein 4 in valvular interstitial cell activation

Matt Newman

Rachana Sainger, Juan B. Grau, Emanuela Branchetti, Paolo Poggio, William F. Seefried, Benjamin C. Field, Michael A. Acker, Robert C. Gorman, Joseph H. Gorman, III, Clark W. Hargrove, III, Joseph E. Bavaria, Giovanni Ferrari

J Cell Physiol. Author manuscript; available in PMC 2013 June 1.

Published in final edited form as: J Cell Physiol. 2012 June; 227(6): 2595–2604. doi: 10.1002/jcp.22999

PMCID: 

PMC3288540

Human Myxomatous Mitral Valve Prolapse: Role of Bone Morphogenetic Protein 4 in valvular interstitial cell activation

Matt Newman

Rachana Sainger, Juan B. Grau, Emanuela Branchetti, Paolo Poggio, William F. Seefried, Benjamin C. Field, Michael A. Acker, Robert C. Gorman, Joseph H. Gorman, III, Clark W. Hargrove, III, Joseph E. Bavaria, Giovanni Ferrari

J Cell Physiol. Author manuscript; available in PMC 2013 June 1.

Published in final edited form as: J Cell Physiol. 2012 June; 227(6): 2595–2604. doi: 10.1002/jcp.22999

PMCID: 

PMC3288540